From ab577cc53603797020e19917824d85c4b67a554a Mon Sep 17 00:00:00 2001 From: KHAM Chaimae <k24022051@V-PJ-47-090.salsa.univ-amu.fr> Date: Mon, 18 Nov 2024 14:52:12 +0100 Subject: [PATCH] =?UTF-8?q?Mise=20=C3=A0=20jour=20du=20README=20du=20workf?= =?UTF-8?q?low?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- workflow/README.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/workflow/README.md b/workflow/README.md index 77ea7df..a3c41a0 100644 --- a/workflow/README.md +++ b/workflow/README.md @@ -1,16 +1,16 @@ This Makefile orchestrates a sequence of R scripts to process data and generate output files. It ensures that each step is executed in the correct order by specifying dependencies between the files. -#File Dependencies: +# File Dependencies: Each target file is dependent on one or more source files. For example, results/tp4/TP4_asbvg.RData depends on results/tp3/TP3_asbvg.RData. -#R Script Execution: +# R Script Execution: For each target file, an associated R script is run using Rscript. The scripts are executed in sequence, ensuring that the necessary input files are generated before the next step. -#Data Download: +# Data Download: The first step downloads the necessary data files (penncath.bed, penncath.bim, penncath.fam) using the src/download_data.R script. -#Data Processing: +# Data Processing: After the data is downloaded, subsequent R scripts (src/tp1.R, src/tp2.R, src/tp3.R, and src/tp4.R) process the data and produce intermediate and final results (stored in .RData files). -- GitLab