From 282b5fc2fe0dd5e4237721f342ecc4b939c4bab3 Mon Sep 17 00:00:00 2001
From: TRON Kelly <t19016063@V-PJ-47-066.salsa.univ-amu.fr>
Date: Wed, 23 Oct 2024 14:53:29 +0200
Subject: [PATCH] tp3
---
src/tp3.R | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
create mode 100644 src/tp3.R
diff --git a/src/tp3.R b/src/tp3.R
new file mode 100644
index 0000000..d7c176f
--- /dev/null
+++ b/src/tp3.R
@@ -0,0 +1,25 @@
+#load data
+load("results/tp2/TP2_asbvg.RData")
+
+#fichier de sortie
+output_dir = "results/tp3"
+dir.create(output_dir, showWarnings = F, recursive = T)
+
+#library
+if (!require("BiocManager", quietly = TRUE))
+ install.packages("BiocManager")
+
+if (!require("snpStats", quietly = TRUE))
+ BiocManager::install("snpStats")
+
+if (!require("doParallel", quietly = TRUE))
+ BiocManager::install("doParallel")
+
+library(snpStats)
+library(plyr)
+library(GenABEL)
+library(doParallel)
+
+rdata_path = file.path(output_dir,"TP3_asbvg.RData")
+save.image(rdata_path)
+
--
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