From b09d1c18d72cd128d2874fd86062fcdf325dc06a Mon Sep 17 00:00:00 2001
From: TRON Kelly <t19016063@V-PJ-47-066.salsa.univ-amu.fr>
Date: Wed, 23 Oct 2024 14:20:14 +0200
Subject: [PATCH] workflow make

---
 doc/01install.md | 43 +++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 43 insertions(+)
 create mode 100644 doc/01install.md

diff --git a/doc/01install.md b/doc/01install.md
new file mode 100644
index 0000000..0bc01b1
--- /dev/null
+++ b/doc/01install.md
@@ -0,0 +1,43 @@
+# Install the micromamba (si ce n'est pas déjà installé)
+
+~~~
+curl -L https://micromamba.snakepit.net/api/micromamba/linux-64/latest | tar -xvj bin/micromamba
+
+mkdir -p $HOME/.local/bin
+
+mv bin/micromamba $HOME/.local/bin/
+
+mkdir -p $HOME/micromamba
+~~~
+
+Add these lines to ~/.bashrc
+
+~~~
+export PATH=$HOME/.local/bin:$PATH
+
+export MAMBA_ROOT_PREFIX=$HOME/micromamba
+
+eval "$(micromamba shell hook -s posix)"
+~~~
+
+# Create a m2bsgreprod micromamba environment and install apptainer 1.3.2
+
+~~~
+micromamba create --name m2bsgreprod python=3.12  -c conda-forge
+
+micromamba activate m2bsgreprod
+
+micromamba install conda-forge::apptainer=1.3.2
+~~~
+
+# Build the apptainer image
+
+~~~
+mkdir -p results/containers
+
+sudo /home/gonzalez/Software/micromamba/envs/m2bsgreprod/bin/apptainer  build results/containers/m2bsgreprod.sif   containers/m2bsgreprod.def
+~~~
+
+
+
+
-- 
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