diff --git a/src/tp3.R b/src/tp3.R index d7c176fd6e9d9dc5270ea7042547b1e7d8df4f67..8b3c1eb57c7fcc3e282a6121d0d487f280faa2ec 100644 --- a/src/tp3.R +++ b/src/tp3.R @@ -6,19 +6,19 @@ output_dir = "results/tp3" dir.create(output_dir, showWarnings = F, recursive = T) #library -if (!require("BiocManager", quietly = TRUE)) +#if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") -if (!require("snpStats", quietly = TRUE)) +#if (!require("snpStats", quietly = TRUE)) BiocManager::install("snpStats") -if (!require("doParallel", quietly = TRUE)) +#if (!require("doParallel", quietly = TRUE)) BiocManager::install("doParallel") -library(snpStats) -library(plyr) -library(GenABEL) -library(doParallel) +#library(snpStats) +#library(plyr) +#library(GenABEL) +#library(doParallel) rdata_path = file.path(output_dir,"TP3_asbvg.RData") save.image(rdata_path)