containers

results/containers/Dockerfile

+from rocker/rstudio:4.1.3
+
+RUN apt-get update && \
+  apt-get install -y \
+  libcurl4-openssl-dev \
+  libssl-dev libssh2-1-dev \
+  libxml2-dev zlib1g-dev \
+  && \
+  R -e "install.packages(c('devtools'))"
+
+# Update the system and install necessary libraries for R packages
+RUN apt-get update && apt-get install -y \
+    libcurl4-openssl-dev \
+    libssl-dev \
+    libxml2-dev \
+    libxt-dev \
+    libgit2-dev \
+    && apt-get clean \
+    && rm -rf /var/lib/apt/lists/*
+
+# Install other R
+RUN R -e "install.packages(c('plyr', 'BiocManager'), repos='https://cran.biotools.fr')" \
+    && R -e "BiocManager::install(c('snpStats', 'SNPRelate'))"
+
+# Expose the RStudio Server port
+EXPOSE 8787
+
+# Start RStudio Server
+CMD ["/init"]
+