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    Download Clone

    mkdir m2bsgreprod

    git clone git@etulab.univ-amu.fr:o22025448/tp1ara.git > m2bsgreprod

    Install the micromamba or equiv.

    Create a m2bsgreprod micromamba environment and install apptainer 1.3.2

    Build the apptainer image

    mkdir -p results/containers

    sudo /home/gonzalez/Software/micromamba/envs/m2bsgreprod/bin/apptainer build results/containers/m2bsgreprod.sif containers/m2bsgreprod.def

    Execute the Rscripts

    micromamba activate m2bsgreprod

    apptainer exec results/containers/m2bsgreprod3.sif make -f workflows/makefile